Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PAAD rs80343030 chr20:46417761 G/A 9.58E-13 177 15.57 13.13 1.37 KM Plot
PAAD rs8042465 chr15:101270219 G/A 2.29E-8 171 4.65 15.13 15.77 KM Plot
PAAD rs8045911 chr16:8735200 G/A 0.000157 178 4.93 15.5 15.6 KM Plot
PAAD rs8046036 chr16:74552127 C/T 1.02E-6 171 16.03 13.12 6.22 KM Plot
PAAD rs805559 chr20:37157953 A/G 6.63E-5 176 5.97 15.57 15.67 KM Plot
PAAD rs8062990 chr16:8735120 T/C 0.000157 178 4.93 15.5 15.6 KM Plot
PAAD rs8067806 chr17:27424316 C/T 2.51E-5 178 14.52 19.53 5.03 KM Plot
PAAD rs807054 chr1:26237335 A/G 1.06E-7 177 3.17 15.77 15.43 KM Plot
PAAD rs8071540 chr17:12914321 G/A 3.49E-6 177 16.05 15.47 7.77 KM Plot
PAAD rs807250 chr1:26118149 A/G 9.02E-8 178 3.17 15.67 15.48 KM Plot
PAAD rs8078952 chr17:12910790 G/A 3.49E-6 177 16.05 15.47 7.77 KM Plot
PAAD rs8109271 chr19:18294384 G/A 1.96E-12 171 15.55 19.4 1.37 KM Plot
PAAD rs8117430 chr20:46409853 A/C 1.2E-12 176 15.53 13.15 1.37 KM Plot
PAAD rs8131044 chr21:48087846 T/G 4.63E-5 178 7.47 15.62 15.43 KM Plot
PAAD rs8139890 chr22:32023089 G/A 1.03E-6 177 15.53 15.13 3.43 KM Plot